Package picard.vcf

Class AccumulateVariantCallingMetrics

java.lang.Object
picard.cmdline.CommandLineProgram
picard.vcf.AccumulateVariantCallingMetrics

@DocumentedFeature public class AccumulateVariantCallingMetrics extends CommandLineProgram
Combines multiple Variant Calling Metrics files into a single file.
  • Field Details

    • INPUT

      @Argument(shortName="I", doc="Paths (except for the file extensions) of Variant Calling Metrics files to read and merge.", minElements=1) public List<PicardHtsPath> INPUT
    • OUTPUT

      @Argument(shortName="O", doc="Path (except for the file extension) of output metrics files to write.") public File OUTPUT
  • Constructor Details

    • AccumulateVariantCallingMetrics

      public AccumulateVariantCallingMetrics()
  • Method Details

    • doWork

      protected int doWork()
      Description copied from class: CommandLineProgram
      Do the work after command line has been parsed. RuntimeException may be thrown by this method, and are reported appropriately.
      Specified by:
      doWork in class CommandLineProgram
      Returns:
      program exit status.